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Zebrafish Export structural variants

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Zebrafish Export structural variants

You can use BioMart to query variants, not just genes. (Make sure you use the right Datasets)

Export the study accession, source name, chromosome, sequence region start and end (in bp) of zebrafish structural variations (SV) on chromosome 1, starting at 10,000,000 and ending at 50,000,000.

Choose Ensembl Variation and Zebrafish Structural Variants. Filters: REGION: Chromosome 1 Coordinates: Start: 10000000 End: 50000000 Count shows 159 out of 5735 structural variants. Attributes: Structural Variant (SV) Informations: Study accession and Source name Structural Variant (SV) Location: Chromosome/scaffold name, Chromosome/scaffold position start (bp) and Chromosome/scaffold position end (bp).