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Exporting homologues with BioMart

For a list of Trypanosoma brucei genes, export the Leishmania major orthologues.

Tb927.3.3470, Tb927.3.3520, Tb11.01.7770, Tb927.8.5110, Tb927.1.1420

Go to BioMart and click New. Choose the Ensembl Protists Genes database. Choose the Trypanosoma brucei genes dataset.

Click on Filters in the left panel. Expand the GENE section by clicking on the + box. Enter the gene list in the Input external references ID list box. Gene stable ID(s) should be preselected.

Click on Attributes in the left panel. Select the Homologues attributes at the top of the page. Expand the GENE section by clicking on the + box. Deselect Gene stable ID version, Transcript stable ID and Transcript stable ID version. Expand the ORTHOLOGUES [K-O] section by clicking on the + box. Select Leishmania major Gene ID.

Click Results. Select View: All rows as HTML.