Ensembl TrainingEnsembl Home
More ▼
Ensembl Protists: exporting homologues with BioMart

<- Back to exercise page

Ensembl Protists: exporting homologues with BioMart

Go to Ensembl Protists. For a list of , export the Find Leishmania major orthologues for these Trypanosoma brucei genes: Tb927.3.3470, Tb927.3.3520, Tb11.01.7770, Tb927.8.5110, Tb927.1.1420

  1. Go to BioMart, select the Ensembl Protists Genes database and choose the Trypanosoma brucei genes dataset.

  2. Click on Filters in the left panel. Expand the GENE section. Enter the gene list in the Input external references ID list box. Gene stable ID(s) should be preselected.

  3. Click on Attributes in the left panel. Select the Homologues attributes at the top of the page. Expand the GENE section. Deselect Gene stable ID version, Transcript stable ID and Transcript stable ID version. Expand the ORTHOLOGUES [K-O] section and select Leishmania major Gene ID.

  4. Click Results. Select View: All rows as HTML to open the entire table in a new tab. If you prefer, you can also export as a CSV, TSV or XLS file by using the Export all results to option.