Ensembl TrainingEnsembl Home

<- Back to exercise page

VEP in bacteria

Find the genome for Bacteroides fragilis 638R and launch the VEP tool. Use the VEP to predict the effects of a 7 bp deletion of TCTACAA on the supercontig FQ312004 at the position 258140-258146.

Type Bacteroides fragilis 638R into the species search box on Ensembl Bacteria, then select the genome. Click on Variant Effect Predictor. Put the following into the input box:

FQ312004 258140 258146 TCTACAA/- +

Click Run to get the results.