November - 2021

Ensembl browser workshop, University of North Carolina at Chapel Hill

16 Nov 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing and analysing genomic data.

Open Ensembl Plants Browser Workshop

02 Nov 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl Plants browser, accessing gene, variation and comparative genomics data, and mine these data with BioMart.

October - 2021

University College London: Ensembl Variation Data and the VEP

20 Oct 2021 - Virtual

Work with the Ensembl Outreach team to get hands-on experience accessing and analysing variation data with the Ensembl genome browser.

Ensembl at the Genopole Summer School

19 Oct 2021 - Genopole

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene and variation data, and mine these data with BioMart

ASHG 2021 Ancillary Workshop: Using the Ensembl genome browser to interrogate disease-associated variants

18 Oct 2021 - Virtual

Genetic variation between individuals results in a range of human phenotypes, from differences in the immune response against transmissible diseases, such as COVID-19, to rare developmental disorders. The Ensembl genome browser and Variant Effect Predictor (VEP) toolset allows fast and flexible interrogation and annotation of genetic variants to predict functional consequences in the context of the Ensembl/GENCODE and RefSeq genesets, allowing further variant filtering and prioritisation.
This virtual workshop will introduce you to the principles of interrogating variation data using the Ensembl genome browser. You will also learn how to use the Ensembl VEP to map genetic variants onto Ensembl/GENCODE transcripts and other annotation including the MANE Select and MANE Plus Clinical transcript sets, regulatory regions and regions of evolutionary conservation to determine their likely functional effects.
The workshop is aimed at new and existing Ensembl users, from the wet-lab, diagnostic and industry communities. There are no prerequisites for this workshop.

Ensembl session at From Specimens to Genomes course

15 Oct 2021 - EBI

Explore the Ensembl Rapid Release site to see genomes of newly-annotated species.

MSt in Genomic Medicine, Module 1: Introduction to Human Genetics and Genomics

13 Oct 2021 - University of Cambridge: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl genome browser.

MSc Genomic Medicine: Ensembl Browser Workshop, University of Southampton

12 Oct 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene and variation data, and to learn how to use the Variant Effect Predictor (VEP).

Ensembl REST API workshop, American University in Cairo

05 Oct 2021 - American University in Cairo

Learn about accessing Ensembl data programmatically using the Ensembl REST API.

Ensembl REST API workshop, University of Cambridge, 4 October 2021

04 Oct 2021 - University of Cambridge: Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

Ensembl browser workshop, American University in Cairo

04 Oct 2021 - American University in Cairo

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation and gene regulation data, and mine these data with BioMart

September - 2021

Bioinformatics resources for Immunologists: Ensembl regulation resources

30 Sep 2021 - Virtual

An introduction to the Ensembl regulatory build and methods to access genomic regulation data using the Ensembl genome browser

Ensembl browser workshop, University of Cambridge, 30 September 2021

30 Sep 2021 - University of Cambridge: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart.

Ensembl Virtual Browser Workshop, Institute of Genetics and Cancer, Edinburgh

23 Sep 2021 - Virtual- Institute of Genetics and Cancer, Edinburgh, United Kingdom

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl VEPTC Workshop

21 Sep 2021 - Virtual

Work with the Ensembl Outreach team to learn how to annotate your own variation data by using the online VEP tool

Virtual Ensembl REST API workshop, 14th-16th September 2021

14 Sep 2021 - Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

Ensembl Virtual Browser Workshop, 7-9 September 2021

07 Sep 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl: EBI Tools for Biological Data Search and Analysis, Universidad de Los Andes

02 Sep 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl genome browser.

AfSHG: Ensembl REST API workshop, 1 September 2021

01 Sep 2021 - Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

August - 2021

ESHG W10: Using the Ensembl Variant Effect Predictor (VEP) to interrogate disease-associated variants

30 Aug 2021 - Virtual

This workshop will guide you through the Ensembl/GENCODE and MANE annotation process, allowing you to experience the challenges involved in annotation and transcript selection. You will also learn how to use the Ensembl VEP to map genetic variants onto Ensembl/GENCODE transcripts and other Ensembl annotation including regulatory regions and regions of evolutionary conservation to determine their likely functional effects and filter to prioritise variants.

Ensembl browser workshop, Stella Maris College, 4-6 August 2021

04 Aug 2021 - Stella Maris College: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart.

July - 2021

NextGenHelper Ensembl REST API course

30 Jul 2021 - Virtual

Introduction to Ensembl and its REST API.

NextGenHelper Ensembl browser course

19 Jul 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl Browser Workshop, Ahmadu Bello University

12 Jul 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

UPM Ensembl Variant Effect Predictor (VEP) webinar

06 Jul 2021 - Virtual

Work with the Ensembl Outreach team to learn how to annotate your own variation data by using the online VEP tool

June - 2021

Great Ormond Street Hospital Ensembl browser workshop

29 Jun 2021 - Virtual

Work with the Ensembl Outreach team to get hands-on experience with accessing gene and variation data with the Ensembl genome browser.

Summer School in Bioinformatics 2021, EMBL-EBI

28 Jun 2021 - EMBL-EBI: Virtual

Work with the Ensembl Outreach team to annotate and prioritise your own variants using the Variant Effect Predictor and mine these using the Ensembl Genome Browser.

Ensembl browser workshop - University of Witwatersrand

21 Jun 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart.

Ensembl browser workshop, Decode Life

18 Jun 2021 - Decode Life: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation and comparative genomics data, and mine these data with BioMart.

Virtual REST API course

15 Jun 2021 - Virtual

Introduction to Ensembl and its REST API.

Ensembl Virtual Browser Workshop, 8-10 June 2021

08 Jun 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl browser workshop for UMFST TgMures

04 Jun 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl

R Ladies REST API course

04 Jun 2021 - Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

May - 2021

Virtual REST API course

25 May 2021 - Virtual

Introduction to Ensembl and its REST API.

Ensembl Virtual Browser Workshop, 18-20 May 2021

18 May 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl browser workshop for the University of Ljubljana

04 May 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl

April - 2021

Ensembl browser workshop, University of Nottingham, 29-30 April 2021

29 Apr 2021 - University of Nottingham: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and mine these data with BioMart.

Ensembl browser workshop for UCT

26 Apr 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl

DKFZ Ensembl browser course

19 Apr 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl browser workshop for the Erasmus MC

13 Apr 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl

Royal Marsden Ensembl browser workshop

08 Apr 2021 - Virtual

Work with the Ensembl Outreach team to get hands-on experience with accessing gene and variation data with the Ensembl genome browser.

March - 2021

Ensembl browser workshop for GeneSpectrum

22 Mar 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl

Ensembl Virtual Browser Workshop, 16-18 March 2021

16 Mar 2021 - Virtual

Introductory workshop aimed at wet-lab scientists and bioinformaticians who are new to using Ensembl. Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart

Ensembl browser workshop, Queen Mary University of London, 12 March 2021

12 Mar 2021 - Queen Mary University of London: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation and regulation data, and mine these data with BioMart.

NeuCrest EBI workshop- Ensembl

01 Mar 2021 - Institut Curie - Virtual

Work with the Ensembl Outreach team to get hands-on experience accessing and analysing genomic data with the Ensembl genome browser.

CABANA Workshop: Analysis of Crop Genomics Data, 1st-11th March 2021

01 Mar 2021 - Virtual

Work with the Ensembl and CABANA team to get to grips with the Ensembl Plants browser, including expression reports, comparative genomics and the Variant Effect Predictor. We will also review how to analyze pan-gene sets of clades in Ensembl Plants. The material also covers variant calling, genotyping and the annotation of disease resistance genes.

February - 2021

Ensembl Virtual REST API workshop, 23-25 March 2021

23 Feb 2021 - Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

Ensembl REST API workshop, University of Cambridge, 16 February 2021

16 Feb 2021 - University of Cambridge: Virtual

Work with Ensembl to familarise yourself with the Ensembl REST API for language agnostic programmatic access to Ensembl data.

Ensembl browser workshop, University of Cambridge, 11 February 2021

11 Feb 2021 - University of Cambridge: Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart.

Virtual REST API course

03 Feb 2021 - Virtual

Introduction to Ensembl and its REST API.

MSc. Personalised Medicine, Computational Genomics Module, University College London: Ensembl Variation Data and the VEP

03 Feb 2021 - Virtual

Work with the Ensembl Outreach team to get hands-on experience accessing and analysing variation data with the Ensembl genome browser.

Cambridge MSt in Genomic Medicine, Module 4, 3 February 2021

03 Feb 2021 - Virtual

An introduction to Ensembl genes and variants as part of the Cambridge University Genomic Medicine MSt. This section focusses on using the Ensembl browser to access germline and somatic variation data and how to use the Variation Effect Predictor (VEP)

Ensembl at the EBI Roadshow at the University of Pavia

01 Feb 2021 - Pavia

Introduction to Ensembl data.

January - 2021

Virtual browser workshop

26 Jan 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing and analysing genomic data.

MSc in Genomic Medicine, Queen Mary University of London, 22 January 2021

22 Jan 2021 - Virtual

A short introduction to Ensembl genes and variants as part of the MSc in Genomic Medicine.

Cambridge MSt in Genomic Medicine

20 Jan 2021 - Cambridge

Introduction to Ensembl data.

MSc module: Practical Laboratory and Research Skills, UCL, 20 January 2021

20 Jan 2021 - Virtual

Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene and variation data

Primers for Predocs 2021

19 Jan 2021 - EBI

Introduction to Ensembl and its REST API.

IAMZ-CHIEAM Zaragoza, MSc. Plant Genomics - Alignment and mapping, variant calling and annotation, and comparative genomics

15 Jan 2021 - IAMZ-CHIEAM, Zaragoza, Spain

Work with the Ensembl Outreach team to get to grips with tools and workflows for variant identification and annotation as well as comparative genomics analyses